STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_03479Simple sugar transport system ATP-binding protein. (506 aa)    
Predicted Functional Partners:
C810_03481
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.995
C810_03480
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.993
C810_03478
Hypothetical protein.
 
 0.983
C810_00151
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.972
C810_00148
Hypothetical protein.
 
 0.965
C810_01608
Hypothetical protein.
 
 0.957
C810_01971
Ribose transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 0.953
C810_00149
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.945
C810_01687
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.921
C810_05057
Hypothetical protein.
 
 0.919
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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