STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_03488Hypothetical protein. (140 aa)    
Predicted Functional Partners:
C810_02896
Heavy metal translocating P-type ATPase.
 
  
 0.796
C810_00690
Hypothetical protein.
   
    0.671
C810_02362
Flagellar motor switch protein FliN.
    
   0.643
C810_03489
Hypothetical protein.
  
    0.629
C810_00080
Sigma-70 family RNA polymerase sigma factor.
    
   0.436
C810_01372
Hypothetical protein.
    
   0.436
C810_02379
FliA/WhiG family RNA polymerase sigma factor; Belongs to the sigma-70 factor family.
    
   0.436
C810_02589
Sigma-70 family RNA polymerase sigma factor.
    
   0.436
C810_02812
Sigma-70 family RNA polymerase sigma factor.
    
   0.436
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.