STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_03538Hypothetical protein. (217 aa)    
Predicted Functional Partners:
C810_03539
Hypothetical protein.
 
   
 0.847
C810_03536
Hypothetical protein.
    
  0.545
C810_03537
Hypothetical protein.
       0.533
C810_03641
Hypothetical protein.
  
     0.524
C810_04395
Hypothetical protein.
  
     0.523
C810_02669
Hypothetical protein.
  
     0.501
C810_02647
Hypothetical protein.
  
     0.485
C810_02848
Hypothetical protein.
  
     0.462
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.461
C810_00495
Hypothetical protein.
  
     0.436
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.