STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_03543Hypothetical protein. (635 aa)    
Predicted Functional Partners:
C810_02463
Hypothetical protein.
 
 
 0.920
C810_03686
Hypothetical protein.
 
 
 0.920
C810_01208
Hypothetical protein.
 
 
 0.919
C810_03158
Hypothetical protein.
 
 
  0.901
C810_04502
Hypothetical protein.
 
 
  0.833
C810_01294
Hypothetical protein.
 
 
  0.832
C810_01215
Hypothetical protein.
 
 
  0.829
C810_02462
Hypothetical protein.
 
  
 
0.641
C810_02456
Hypothetical protein.
  
  0.575
C810_00565
Hypothetical protein.
    
  0.528
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.