Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C810_00567 | C810_00569 | Hypothetical protein. | Hypothetical protein. | 0.974 |
C810_00567 | C810_00587 | Hypothetical protein. | Hypothetical protein. | 0.737 |
C810_00567 | C810_02420 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.690 |
C810_00567 | C810_03414 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.757 |
C810_00567 | C810_03675 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.771 |
C810_00567 | C810_03701 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.773 |
C810_00567 | C810_04610 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.770 |
C810_00569 | C810_00567 | Hypothetical protein. | Hypothetical protein. | 0.974 |
C810_00569 | C810_00587 | Hypothetical protein. | Hypothetical protein. | 0.747 |
C810_00569 | C810_02420 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.704 |
C810_00569 | C810_03414 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.768 |
C810_00569 | C810_03675 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.772 |
C810_00569 | C810_03701 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.774 |
C810_00569 | C810_04610 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.770 |
C810_00587 | C810_00567 | Hypothetical protein. | Hypothetical protein. | 0.737 |
C810_00587 | C810_00569 | Hypothetical protein. | Hypothetical protein. | 0.747 |
C810_00587 | C810_01104 | Hypothetical protein. | Hypothetical protein. | 0.735 |
C810_00587 | C810_03674 | Hypothetical protein. | Hypothetical protein. | 0.726 |
C810_00587 | C810_03675 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.912 |
C810_00587 | C810_04610 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.944 |
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