Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_03804Hypothetical protein. (310 aa)    
Predicted Functional Partners:
C810_03830
Hypothetical protein.
 
  
  0.755
C810_03809
Hypothetical protein.
 
  
 0.749
C810_03803
Hypothetical protein.
 
 
 0.736
C810_00228
Hypothetical protein.
  
     0.685
C810_03896
Hypothetical protein.
 
 
 0.638
C810_02663
Hypothetical protein.
  
     0.609
C810_03805
Hypothetical protein.
  
  
 0.568
thrS
threonine-tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
  0.510
C810_03814
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
 
  
 0.486
C810_03806
Hypothetical protein.
  
  
 0.471
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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