STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04079Hypothetical protein. (414 aa)    
Predicted Functional Partners:
C810_04080
Hypothetical protein.
 
  0.951
C810_03829
Parallel beta-helix.
  
 
 0.869
C810_04078
Hypothetical protein.
       0.790
C810_04407
Hypothetical protein.
 
  0.753
C810_04081
Hypothetical protein.
 
    0.711
C810_04077
Hypothetical protein.
       0.682
C810_04227
Hypothetical protein.
 
  0.674
C810_03234
Hypothetical protein.
 
  0.664
C810_04158
Hypothetical protein.
 
  0.658
C810_01041
Hypothetical protein.
 
  0.655
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.