STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04095ATP-binding cassette, subfamily B, bacterial; Overlaps another CDS with the same product name. (661 aa)    
Predicted Functional Partners:
C810_04096
ATP-binding cassette, subfamily B, bacterial; Overlaps another CDS with the same product name.
 
  
 
0.883
C810_01171
Hypothetical protein.
 
     
0.875
C810_00936
Hypothetical protein.
 
  
  0.846
C810_02315
ABC-type bacteriocin transporter.
 
 
 
0.803
ecfA
Cobalt/nickel transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
 
0.784
C810_04167
Phosphonate C-P lyase system protein PhnL.
 
     
0.553
C810_01894
Hypothetical protein.
  
  
 
0.523
C810_00721
Hypothetical protein.
  
  
 
0.519
C810_04098
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.480
dnaK
Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.466
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.