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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04124Zinc transport system permease. (270 aa)    
Predicted Functional Partners:
C810_04125
Zinc transport system ATP-binding protein.
 
 0.999
C810_04126
Hypothetical protein.
 
 
 0.999
C810_00539
Hypothetical protein.
  
 
 0.588
C810_02564
Hypothetical protein.
  
 
 0.588
C810_05117
Hypothetical protein.
  
 
 0.588
C810_01790
Maltose/maltodextrin transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    
  0.582
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.577
C810_01815
Hypothetical protein.
    
 0.533
C810_02940
Hypothetical protein.
    
 0.533
C810_04344
Hypothetical protein.
    
 0.497
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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