Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_04145Hypothetical protein. (803 aa)    
Predicted Functional Partners:
C810_04144
Hypothetical protein.
 
  
 
0.969
C810_02206
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.910
C810_04140
Hypothetical protein.
 
  
 0.906
C810_04931
Hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.884
C810_02335
Hypothetical protein.
     
 0.876
C810_00742
Hypothetical protein; Belongs to the glycosyl hydrolase 13 family.
     
 0.874
C810_04143
Hypothetical protein.
 
   
 0.833
C810_05036
Hypothetical protein.
 
  
 0.796
C810_03527
Hypothetical protein.
    
 0.771
C810_00732
Phosphoglucomutase.
    
 0.764
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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