STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_043071A family penicillin-binding protein. (923 aa)    
Predicted Functional Partners:
C810_02041
Hypothetical protein.
 
 
 0.923
C810_02219
Hypothetical protein.
 
 
 0.907
C810_02709
Hypothetical protein.
 
 
 0.906
C810_02486
Hypothetical protein.
 
 
 0.894
C810_02220
Stage V sporulation protein D (sporulation-specific penicillin-binding protein).
 
 
 0.849
C810_03149
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.
  
 
 0.794
C810_02005
Hypothetical protein; Belongs to the peptidase S11 family.
  
 
 0.782
C810_02713
Hypothetical protein; Belongs to the SEDS family.
 
 
 
 0.749
C810_02707
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
 
 0.738
C810_02680
Hypothetical protein.
   
 0.726
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.