STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04321Hypothetical protein. (519 aa)    
Predicted Functional Partners:
C810_04319
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
C810_04320
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.994
C810_04322
Hypothetical protein.
 
 
 0.986
C810_03281
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.978
C810_03279
Hypothetical protein.
 
 
 0.960
C810_03282
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.919
C810_02917
Hypothetical protein.
 
 
 0.897
C810_00148
Hypothetical protein.
 
  
  0.549
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.547
C810_00149
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.496
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.