Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
C810_01939 | C810_01940 | Oligopeptide transport system permease. | Oligopeptide transport system permease. | 0.995 |
C810_01939 | C810_01941 | Oligopeptide transport system permease. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily. | 0.993 |
C810_01939 | C810_02558 | Oligopeptide transport system permease. | Peptide/nickel transport system permease. | 0.981 |
C810_01939 | C810_02561 | Oligopeptide transport system permease. | Nickel ABC transporter, nickel/metallophore periplasmic binding protein. | 0.970 |
C810_01939 | C810_04382 | Oligopeptide transport system permease. | Hypothetical protein. | 0.714 |
C810_01939 | C810_04383 | Oligopeptide transport system permease. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily. | 0.977 |
C810_01939 | C810_04384 | Oligopeptide transport system permease. | Peptide/nickel transport system permease. | 0.983 |
C810_01939 | C810_04386 | Oligopeptide transport system permease. | Hypothetical protein. | 0.971 |
C810_01940 | C810_01939 | Oligopeptide transport system permease. | Oligopeptide transport system permease. | 0.995 |
C810_01940 | C810_01941 | Oligopeptide transport system permease. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily. | 0.999 |
C810_01940 | C810_02557 | Oligopeptide transport system permease. | Hypothetical protein. | 0.959 |
C810_01940 | C810_02561 | Oligopeptide transport system permease. | Nickel ABC transporter, nickel/metallophore periplasmic binding protein. | 0.963 |
C810_01940 | C810_04382 | Oligopeptide transport system permease. | Hypothetical protein. | 0.795 |
C810_01940 | C810_04383 | Oligopeptide transport system permease. | Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily. | 0.988 |
C810_01940 | C810_04384 | Oligopeptide transport system permease. | Peptide/nickel transport system permease. | 0.822 |
C810_01940 | C810_04385 | Oligopeptide transport system permease. | Hypothetical protein. | 0.976 |
C810_01940 | C810_04386 | Oligopeptide transport system permease. | Hypothetical protein. | 0.965 |
C810_01941 | C810_01939 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily. | Oligopeptide transport system permease. | 0.993 |
C810_01941 | C810_01940 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily. | Oligopeptide transport system permease. | 0.999 |
C810_01941 | C810_02557 | Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily. | Hypothetical protein. | 0.958 |
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