STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04412Hypothetical protein. (227 aa)    
Predicted Functional Partners:
C810_05119
Hypothetical protein.
 
 0.980
C810_04411
Hypothetical protein.
  0.966
C810_04283
Hypothetical protein.
 
 0.952
C810_04930
Hypothetical protein.
 
 0.945
C810_00354
Hypothetical protein.
  0.858
C810_00135
Hypothetical protein.
 0.850
C810_01166
Hypothetical protein.
 
  0.818
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
    
 0.790
C810_04885
Hypothetical protein.
 
  0.774
C810_04768
Hypothetical protein.
 
 0.744
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.