Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_04424Trehalose operon repressor. (240 aa)    
Predicted Functional Partners:
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.856
C810_04423
PTS system, trehalose-specific IIBC component.
 
   
 0.761
C810_03154
PTS system, glucose subfamily, IIA component.
 
 
 0.681
C810_01180
PTS system, sucrose-specific IIBC component.
 
 
 0.671
C810_04294
PTS system, sucrose-specific IIBC component.
 
 
 0.644
C810_04871
Hypothetical protein.
  
     0.628
C810_01879
PTS system, glucose subfamily, IIA component.
 
  
 0.607
C810_02296
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.595
C810_02306
PTS system, glucose subfamily, IIA component.
 
  
 0.526
C810_02290
PTS system, beta-glucoside-specific IIABC component.
 
 
 0.524
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.