Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C810_04448Hypothetical protein. (158 aa)    
Predicted Functional Partners:
C810_00544
Hypothetical protein.
  
  
  0.611
C810_00942
Hypothetical protein.
 
     0.572
C810_01790
Maltose/maltodextrin transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
     
  0.542
C810_00257
Hypothetical protein.
     
  0.506
C810_02908
Hypothetical protein.
     
  0.506
C810_01297
Hypothetical protein.
 
     0.492
ecfA
Cobalt/nickel transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 
  0.487
ecfA-2
Cobalt/nickel transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 
  0.487
C810_04450
ATP-dependent Lon protease.
       0.434
C810_04449
Hypothetical protein.
       0.404
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.