STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04534Hypothetical protein. (148 aa)    
Predicted Functional Partners:
C810_04462
Hypothetical protein.
  
     0.759
C810_03829
Parallel beta-helix.
  
     0.755
C810_03365
Hypothetical protein.
 
   0.712
C810_04044
Hypothetical protein.
  
     0.711
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
 
     0.574
C810_00129
Hypothetical protein.
  
    0.568
C810_04535
Hypothetical protein.
       0.566
C810_04533
Hypothetical protein.
       0.558
C810_03903
Hypothetical protein.
  
    0.531
C810_01857
Hypothetical protein.
  
 0.493
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.