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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04591MutE/EpiE family lantibiotic protection ABC transporter permease subunit. (242 aa)    
Predicted Functional Partners:
C810_04590
MutG family lantibiotic protection ABC transporter permease subunit.
 
   
 0.955
C810_04592
Lantibiotic protection ABC transporter, ATP-binding subunit.
 
 
 0.948
C810_04587
Hypothetical protein.
 
   
 0.940
C810_04588
Hypothetical protein.
 
     0.921
C810_04791
MutG family lantibiotic protection ABC transporter permease subunit.
 
   
 0.775
C810_04789
Lantibiotic protection ABC transporter, ATP-binding subunit.
 
 
 0.774
C810_04589
Hypothetical protein.
       0.759
C810_04794
Hypothetical protein.
 
   
 0.718
C810_00821
Hypothetical protein.
  
     0.646
C810_04793
Hypothetical protein.
 
     0.619
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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