STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04712Hypothetical protein. (253 aa)    
Predicted Functional Partners:
C810_04710
Hypothetical protein.
 
     0.908
C810_04711
Hypothetical protein.
 
     0.846
C810_04713
Sigma-70 family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.748
C810_04507
Hypothetical protein.
  
     0.641
C810_04226
Hypothetical protein.
 
     0.594
C810_01042
Hypothetical protein.
 
     0.513
C810_03218
Hypothetical protein.
  
     0.481
C810_05150
Hypothetical protein.
  
     0.453
C810_04395
Hypothetical protein.
  
     0.420
C810_02786
Sigma-70 family RNA polymerase sigma factor.
 
     0.413
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.