STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04738Hypothetical protein. (174 aa)    
Predicted Functional Partners:
C810_04737
Spore maturation protein A.
  
 0.999
C810_02756
Sporulation integral membrane protein YlbJ.
 
  
 0.844
C810_02091
Stage III sporulation protein AA.
  
  
 0.754
C810_02080
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.728
C810_02094
Stage III sporulation protein AD.
  
   
 0.696
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
   
 0.690
C810_02092
Stage III sporulation protein AB.
  
  
 0.652
C810_01001
Stage II sporulation protein R.
  
   
 0.619
C810_02799
Sporulation protein YqfD.
  
   
 0.611
C810_03002
Stage II sporulation protein P.
  
   
 0.600
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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