STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04783Excisionase family DNA binding domain-containing protein; Overlaps another CDS with the same product name. (70 aa)    
Predicted Functional Partners:
C810_04784
Excisionase family DNA binding domain-containing protein; Overlaps another CDS with the same product name.
 
     0.951
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.946
C810_04782
Hypothetical protein; Belongs to the 'phage' integrase family.
 
     0.939
C810_04785
Hypothetical protein.
       0.779
C810_01637
Hypothetical protein.
  
     0.503
C810_01027
Hypothetical protein.
  
     0.488
C810_04528
Hypothetical protein.
  
     0.486
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
     
 0.468
C810_00260
Aconitate hydratase 1.
     
 0.440
C810_05002
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
  0.432
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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