STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_04871Hypothetical protein. (221 aa)    
Predicted Functional Partners:
C810_04948
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.787
C810_04424
Trehalose operon repressor.
  
     0.628
C810_04872
Hypothetical protein.
 
    0.546
C810_02296
N-acetylglucosamine-6-phosphate deacetylase.
  
  
 0.532
C810_03166
AraC family transcriptional regulator, arabinose operon regulatory protein.
  
  
 0.475
C810_03501
Hypothetical protein.
  
   
 0.467
C810_01949
Hypothetical protein.
  
    0.465
C810_03444
Hypothetical protein.
  
    0.465
C810_04815
Hypothetical protein.
  
    0.465
C810_02241
Hypothetical protein.
  
   
 0.459
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.