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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_05037Hypothetical protein. (289 aa)    
Predicted Functional Partners:
C810_01767
Hypothetical protein.
    
   0.741
C810_01810
Hypothetical protein.
 
 
  0.590
C810_00262
Hypothetical protein.
  
     0.528
C810_05036
Hypothetical protein.
       0.499
C810_02926
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
   
    0.485
C810_01211
Hypothetical protein.
  
  
 0.482
C810_01546
Hypothetical protein; Belongs to the flavin oxidoreductase frp family.
  
  
 0.482
C810_04806
Hypothetical protein.
  
  
 0.482
C810_04075
Hypothetical protein.
   
    0.469
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
   
    0.453
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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