STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C810_05055Hypothetical protein. (491 aa)    
Predicted Functional Partners:
xylB
Xylulokinase.
 
 
 0.849
C810_00673
Hypothetical protein.
 
 
 0.638
C810_04161
Hypothetical protein.
 
 
 0.547
C810_03054
Hypothetical protein.
  
     0.520
C810_03053
Hypothetical protein.
  
     0.495
C810_00137
Hypothetical protein.
 
  
 0.471
C810_03476
Hypothetical protein.
  
     0.433
C810_05057
Hypothetical protein.
 
     0.429
C810_05054
Hypothetical protein.
       0.417
C810_00674
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.415
Your Current Organism:
Lachnospiraceae bacterium A2
NCBI taxonomy Id: 397290
Other names: L. bacterium A2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.