Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_00537Sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase. (228 aa)    
Predicted Functional Partners:
C804_00536
Acyl carrier protein.
  
 
 0.930
C804_00538
Hypothetical protein.
 
    0.894
C804_00539
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  0.874
fabZ
Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.
  
 
 0.865
C804_00530
Hypothetical protein.
 
     0.801
C804_00528
Hypothetical protein.
 
     0.798
C804_03102
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
  0.793
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
   
 
 0.785
C804_00535
Hypothetical protein.
       0.775
C804_00534
Hypothetical protein.
       0.765
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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