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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_00951Hypothetical protein; Belongs to the N(4)/N(6)-methyltransferase family. (278 aa)    
Predicted Functional Partners:
C804_01502
Hypothetical protein; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.706
C804_05861
Hypothetical protein.
 
     0.578
C804_00952
Hypothetical protein.
       0.505
C804_00949
Hypothetical protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
    
0.473
lon
ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
     
 0.468
C804_05365
DNA adenine methylase.
 
  
 0.462
C804_05864
Hypothetical protein.
 
     0.439
C804_05865
Hypothetical protein.
 
     0.422
C804_00950
Hypothetical protein.
  
    0.416
C804_00953
Hypothetical protein.
       0.401
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.