STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_01302Hypothetical protein. (425 aa)    
Predicted Functional Partners:
C804_05414
Hypothetical protein.
  
     0.771
C804_02198
Hypothetical protein.
  
  
  0.757
C804_04026
Hypothetical protein.
  
  
  0.713
C804_04948
Hypothetical protein.
  
  
  0.679
C804_03681
Hypothetical protein.
  
  
  0.676
C804_04813
Hypothetical protein.
  
  
  0.653
C804_04605
Hypothetical protein.
  
  
  0.646
C804_05923
Hypothetical protein.
  
  
  0.646
C804_04578
Hypothetical protein.
  
  
  0.619
C804_04552
Hypothetical protein.
  
  
  0.617
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.