STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_01361Hypothetical protein. (355 aa)    
Predicted Functional Partners:
C804_02221
Hypothetical protein.
   
 0.981
C804_03427
PAS domain S-box protein.
   
 0.980
C804_05431
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.971
C804_05432
Simple sugar transport system permease; Belongs to the binding-protein-dependent transport system permease family.
 0.971
C804_01365
Methyl-galactoside transport system ATP-binding protein.
 
 0.970
C804_05430
Simple sugar transport system ATP-binding protein.
 
 0.959
C804_01364
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.954
C804_00568
Hypothetical protein.
   
 0.952
C804_03950
Hypothetical protein.
   
 0.952
C804_00482
Hypothetical protein.
  
 0.947
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.