close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_01468Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type. (280 aa)    
Predicted Functional Partners:
C804_01467
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type.
 
 0.999
C804_05599
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.981
C804_03277
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 
 0.969
argH
Argininosuccinate lyase.
    
 0.946
C804_01837
Aminotransferase.
    
  0.940
C804_01852
Hypothetical protein.
    
  0.940
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 
 0.935
C804_04694
L-lactate dehydrogenase.
  
 
 0.935
C804_02072
Oxaloacetate decarboxylase, alpha subunit.
    
 0.878
C804_03243
Hypothetical protein.
  
 
 0.852
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.