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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_01554Hypothetical protein. (494 aa)    
Predicted Functional Partners:
C804_04833
Hypothetical protein.
  
     0.757
C804_05484
Hypothetical protein.
  
     0.745
C804_01082
Hypothetical protein; Belongs to the 'phage' integrase family.
  
     0.743
C804_01177
Hypothetical protein.
  
     0.739
C804_03744
Hypothetical protein.
  
     0.728
C804_03842
Hypothetical protein.
  
     0.728
C804_03848
Hypothetical protein.
  
     0.728
C804_05387
Hypothetical protein.
  
     0.728
C804_05010
Hypothetical protein.
  
     0.724
C804_00041
Hypothetical protein.
  
     0.722
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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