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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_02152Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (289 aa)    
Predicted Functional Partners:
C804_02151
MreB/Mrl family cell shape determining protein.
 
 
 0.997
C804_02153
Rod shape-determining protein MreD.
 
 
 0.996
minC
Hypothetical protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
 
  
 0.988
C804_02154
Hypothetical protein.
 
 
 0.985
C804_03148
MreB/Mrl family cell shape determining protein.
 
 
 0.985
C804_02052
Hypothetical protein.
 
 
 0.984
C804_02156
Septum site-determining protein MinD.
  
    0.952
C804_02150
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.928
C804_00320
Hypothetical protein.
 
 
 0.925
C804_02366
Hypothetical protein.
 
 
 0.920
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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