Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_02153Rod shape-determining protein MreD. (171 aa)    
Predicted Functional Partners:
C804_02152
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.995
minC
Hypothetical protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
 
  
 0.985
C804_02154
Hypothetical protein.
 
  
 0.942
C804_02156
Septum site-determining protein MinD.
  
  
 0.937
C804_02151
MreB/Mrl family cell shape determining protein.
  
  
 0.927
C804_02366
Hypothetical protein.
 
  
 0.847
C804_01255
Hypothetical protein.
  
  
 0.798
minE
Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
 
     0.795
C804_02158
Hypothetical protein; Belongs to the SEDS family.
 
  
 0.793
C804_02150
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.786
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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