STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_02269Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (495 aa)    
Predicted Functional Partners:
C804_02271
Hypothetical protein.
 
  
  0.960
C804_02747
Sucrose phosphorylase.
 
 
 0.820
C804_03742
Hypothetical protein.
 
 0.773
C804_04835
Hypothetical protein.
     
 0.740
C804_02268
Multiple sugar transport system substrate-binding protein.
 
     0.728
C804_02931
Hypothetical protein.
  
 
 0.695
C804_04343
Hypothetical protein.
  
 
 0.695
C804_04051
Hypothetical protein.
 
  
 0.617
C804_00835
2-dehydro-3-deoxygluconokinase.
  
 
 0.608
C804_03204
Hypothetical protein.
 
  
 0.608
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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