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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_02422Hypothetical protein. (268 aa)    
Predicted Functional Partners:
C804_00429
Flagellar motor switch protein FliN.
 
 0.999
C804_02895
Hypothetical protein.
 
 0.999
C804_06059
Hypothetical protein.
 
 0.999
C804_00430
Flagellar motor switch protein FliM.
 
 0.997
C804_00447
Hypothetical protein.
 
 0.995
fliE
Flagellar hook-basal body complex protein FliE.
 
 
 0.970
C804_00415
Hypothetical protein.
 
 0.962
C804_00450
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.962
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 
 0.957
C804_00421
Flagellar biosynthesis protein FlhF.
 
 
 0.938
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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