STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_02492Hypothetical protein. (250 aa)    
Predicted Functional Partners:
C804_05503
Hypothetical protein.
  
 0.897
C804_05517
Hypothetical protein.
  
 0.851
C804_04537
Hypothetical protein.
 
  0.805
C804_02491
Hypothetical protein.
       0.773
C804_02797
Hypothetical protein.
 
  0.761
C804_01295
Hypothetical protein.
 
 
 
 0.647
C804_04308
Hypothetical protein.
  
  
 
0.646
C804_01293
Hypothetical protein.
  
 0.639
C804_06400
Hypothetical protein.
  
 0.639
C804_04077
Hypothetical protein.
 
 
 
 0.633
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.