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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_02671Hypothetical protein. (779 aa)    
Predicted Functional Partners:
C804_02670
ABC transporter ATP-binding protein.
 
  0.960
C804_02669
Hypothetical protein.
 
     0.890
C804_05497
ABC transporter ATP-binding protein.
 
  0.834
C804_01369
ABC transporter ATP-binding protein.
 
  0.798
C804_05496
Hypothetical protein.
 
     0.775
C804_01368
Hypothetical protein.
 
     0.763
C804_05495
Hypothetical protein.
  
     0.658
C804_02046
ABC transporter ATP-binding protein.
 
  0.620
C804_05470
ABC transporter ATP-binding protein.
 
  0.620
C804_03799
ABC transporter ATP-binding protein.
 
  0.615
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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