Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bukButyrate kinase; Belongs to the acetokinase family. (355 aa)    
Predicted Functional Partners:
C804_02900
Phosphate butyryltransferase.
 
 0.999
C804_02378
Phosphate acetyltransferase.
 
 0.975
C804_02854
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 0.859
C804_04299
Hypothetical protein.
     
 0.634
C804_06203
Hypothetical protein.
     
 0.628
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
 
   
0.548
C804_06439
Hypothetical protein.
  
    0.537
C804_06440
Hypothetical protein.
  
    0.537
C804_06441
Hypothetical protein.
  
    0.537
C804_02863
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.501
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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