Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_03025Hypothetical protein. (321 aa)    
Predicted Functional Partners:
groL
Chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 0.974
C804_02598
Hypothetical protein.
   
 0.913
C804_02918
Hypothetical protein.
   
 0.913
C804_02989
Hypothetical protein.
   
 0.913
C804_03588
Hypothetical protein.
   
 0.913
dnaK
Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.913
C804_04032
Hypothetical protein; Belongs to the heat shock protein 70 family.
   
 0.913
C804_05061
Hypothetical protein.
   
 0.913
C804_05135
Hypothetical protein.
   
 0.913
C804_06296
Hypothetical protein.
   
 0.913
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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