STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_03097Nucleotide sugar dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. (438 aa)    
Predicted Functional Partners:
C804_00514
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
 0.993
C804_03095
UDP-glucose 4-epimerase.
 
 
 0.965
C804_03117
UDP-N-acetylglucosamine 4,6-dehydratase.
  
 
 0.964
C804_04506
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.922
C804_03103
Hypothetical protein.
  
 
 0.893
C804_03098
Hypothetical protein.
 
 
 0.846
C804_00014
Hypothetical protein.
  
 
 0.845
C804_04492
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.818
C804_01785
Hypothetical protein.
  
 
 0.814
C804_03094
Hypothetical protein.
       0.797
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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