STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_03247Hypothetical protein. (152 aa)    
Predicted Functional Partners:
C804_03248
MATE efflux family protein.
 
    0.724
C804_03246
Hypothetical protein.
       0.510
C804_00001
Hypothetical protein.
  
     0.486
C804_03834
Hypothetical protein.
 
  
 0.485
C804_04400
HAD hydrolase, family IA.
  
  
  0.471
C804_02696
Hypothetical protein.
  
  
  0.468
C804_04147
Hypothetical protein.
  
  
 0.463
C804_05623
Hypothetical protein.
  
  
 0.463
C804_04418
Hypothetical protein.
  
     0.461
C804_03768
Hypothetical protein.
 
  
 0.460
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.