Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_03363Hypothetical protein. (327 aa)    
Predicted Functional Partners:
C804_04201
YD repeat (two copies).
  
 
  0.578
C804_04204
YD repeat (two copies).
  
 
  0.578
C804_05673
Hypothetical protein.
  
  
  0.493
C804_01363
Hypothetical protein.
    
 0.474
C804_04888
Hypothetical protein.
    
 0.474
C804_05519
Hypothetical protein.
    
 0.474
C804_02916
Hypothetical protein.
    
  0.427
C804_00979
Hypothetical protein.
     
  0.425
C804_01818
Hypothetical protein.
    
  0.416
C804_03887
Hypothetical protein.
     
  0.416
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.