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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_03433Hypothetical protein. (707 aa)    
Predicted Functional Partners:
C804_04890
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.805
C804_03939
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.797
C804_03938
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.779
C804_04829
Hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.753
C804_04832
Hypothetical protein.
  
     0.748
C804_01876
Hypothetical protein.
  
 
 0.682
C804_04830
Hypothetical protein.
  
     0.680
C804_04888
Hypothetical protein.
  
     0.591
C804_01844
Hypothetical protein.
  
     0.583
C804_01192
Hypothetical protein; Belongs to the glycosyl hydrolase 31 family.
  
  
 0.582
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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