STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_03473Hypothetical protein. (149 aa)    
Predicted Functional Partners:
C804_03472
Hypothetical protein.
 
 
   0.844
C804_04506
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.760
C804_03324
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.737
C804_05572
Hypothetical protein.
  
 
 0.737
C804_00764
YihY family inner membrane protein; Belongs to the UPF0761 family.
  
  
 0.659
C804_02896
YihY family inner membrane protein; Belongs to the UPF0761 family.
  
  
 0.659
C804_04336
Hypothetical protein.
  
 0.634
C804_04141
Hypothetical protein.
  
 
 0.623
C804_04852
Hypothetical protein.
  
     0.590
C804_01363
Hypothetical protein.
    
 
 0.583
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.