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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_04052Multiple sugar transport system permease; Overlaps another CDS with the same product name. (281 aa)    
Predicted Functional Partners:
C804_06049
Maltose/maltodextrin transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.997
C804_04054
Hypothetical protein.
 
 0.992
C804_04053
Multiple sugar transport system permease; Overlaps another CDS with the same product name.
 
 0.986
C804_04178
Multiple sugar transport system permease.
 
 0.934
C804_04179
Hypothetical protein.
 
 0.929
C804_00857
Hypothetical protein.
 
 0.926
C804_02735
Hypothetical protein.
 
 0.919
C804_03200
Hypothetical protein.
 
 0.913
C804_00398
Multiple sugar transport system permease.
 
 0.900
C804_01142
Hypothetical protein.
  
 0.898
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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