Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_04079Hypothetical protein. (746 aa)    
Predicted Functional Partners:
C804_04078
Hypothetical protein.
 
  0.968
C804_04077
Hypothetical protein.
 
 
  0.914
C804_04076
Hypothetical protein.
 
     0.858
C804_01295
Hypothetical protein.
 
 
  0.799
C804_01294
Hypothetical protein.
 
  0.790
C804_04725
Hypothetical protein.
 
  0.732
C804_01491
Hypothetical protein.
 
  0.723
C804_06401
Hypothetical protein.
 
  0.702
C804_02533
Hypothetical protein.
 
  0.571
C804_02427
Hypothetical protein.
  
     0.548
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.