STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_04428Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. (365 aa)    
Predicted Functional Partners:
C804_04506
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.908
C804_04432
Hypothetical protein.
 
 
  0.906
C804_00520
Hypothetical protein.
 
  0.802
C804_04429
Hypothetical protein.
       0.773
C804_03103
Hypothetical protein.
  
 
 0.754
C804_03117
UDP-N-acetylglucosamine 4,6-dehydratase.
  
 
 0.754
C804_04492
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.686
C804_04445
CDP-glucose 4,6-dehydratase.
  
 
  0.672
C804_04495
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.669
C804_01661
Hypothetical protein.
  
 
 0.651
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.