Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_04464Hypothetical protein; Belongs to the membrane-bound acyltransferase family. (471 aa)    
Predicted Functional Partners:
C804_04084
Hypothetical protein.
  
 
 0.809
C804_04463
Hypothetical protein.
       0.773
C804_04465
Hypothetical protein.
    
  0.661
C804_00335
Hypothetical protein.
 
  
  0.637
C804_04462
Hypothetical protein.
       0.613
C804_04466
Hypothetical protein.
   
  0.609
C804_04467
Hypothetical protein.
   
  0.576
C804_00345
Hypothetical protein.
  
 0.570
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
  
 0.548
C804_00536
Acyl carrier protein.
  
 0.548
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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