Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
C804_04473Hypothetical protein. (563 aa)    
Predicted Functional Partners:
C804_04475
Hypothetical protein.
 
     0.906
C804_04474
Hypothetical protein.
 
     0.900
C804_06535
Hypothetical protein.
    
 0.847
C804_00639
Hypothetical protein.
    
 0.732
C804_02311
Hypothetical protein.
     
  0.722
C804_05956
Hypothetical protein.
     
  0.722
C804_02070
Hypothetical protein.
  
 
  0.696
C804_02366
Hypothetical protein.
  
 
 0.689
C804_02071
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
  
 
  0.680
C804_02916
Hypothetical protein.
   
 
 0.667
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.