STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_04479Hypothetical protein. (302 aa)    
Predicted Functional Partners:
C804_04478
Hypothetical protein.
 
     0.935
C804_04480
Hypothetical protein.
 
    0.925
C804_04481
Hypothetical protein.
 
     0.913
C804_04482
Hypothetical protein.
 
     0.912
C804_03105
Hypothetical protein.
  
     0.770
C804_04444
Hypothetical protein.
  
     0.762
C804_04477
Hypothetical protein.
 
    
0.688
C804_06311
Hypothetical protein.
  
     0.678
C804_04483
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
    0.563
C804_04485
Hypothetical protein.
  
    0.538
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.