STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C804_04481Hypothetical protein. (273 aa)    
Predicted Functional Partners:
C804_04480
Hypothetical protein.
 
     0.961
C804_04482
Hypothetical protein.
 
     0.958
C804_04478
Hypothetical protein.
 
     0.928
C804_04479
Hypothetical protein.
 
     0.913
C804_00522
Hypothetical protein.
 
 
 0.794
C804_05636
Chorismate mutase.
     
 0.772
C804_00521
Hypothetical protein.
  
 
 0.766
C804_01184
Glycerol-3-phosphate cytidylyltransferase.
  
 
 0.766
C804_02300
Hypothetical protein.
  
 
 0.766
C804_04134
Glycerol-3-phosphate cytidylyltransferase.
  
 
 0.766
Your Current Organism:
Lachnospiraceae bacterium A4
NCBI taxonomy Id: 397291
Other names: L. bacterium A4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.